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    Home » Recipes » Gluten Free Muffins & Scones

    Gluten Free Mini Pumpkin Muffins

    Published: Oct 16, 2024 by Nicole Spiridakis ·

    Jump to Recipe Print Recipe

    Gluten free mini pumpkin muffins are so soft and fluffy! Plenty of pumpkin and cozy spices combine in this easy one-bowl recipe to make the best two-bite snack.

    A bowl of gluten free mini pumpkin muffins and muffins next to it.

    Oh my gosh, these mini pumpkins are unbelievably soft and sweet, the perfect easy pumpkin muffin. My girls LOVE these muffins and I love that it's a one-bowl recipe so I can bake a batch before they come home from school and voila! Warm and fall-fragrant muffins are waiting to greet them on the counter. They're also great to tuck into lunchboxes. Your choice of gluten free flour makes these little morsels easily gluten free.

    Go all-in on pumpkin and make my gluten free pumpkin muffins or gluten free pumpkin chocolate chip muffins if you want another pumpkiny boost.

    Jump to:
    • Why You'll Love This Recipe
    • Ingredient Notes
    • Variations
    • Instructions
    • Baking Tip
    • Tips & Substitution Suggestions
    • Proper Storage
    • More Gluten Free Pumpkin Recipes
    • Gluten Free Mini Pumpkin Muffins

    Why You'll Love This Recipe

    If you're craving fall flavors wrapped up in a small package, make these gluten free mini pumpkin muffins. You'll love nibbling on them at breakfast or for a snack anytime.

    • Texture - These muffins have such a light and fluffy texture you won't believe they're gluten free.
    • Use your favorite flour - You can use any gluten free flour you prefer to make these muffins. Or, if you don't need to keep gluten free, use regular all-purpose flour!
    • Beginner-friendly - Whisk, stir, and add to a muffin tin - all using one bowl. So easy!

    Ingredient Notes

    Gluten free mini pumpkin muffins ingredients are text-labeled.
    • Pumpkin puree - Use pure pumpkin puree NOT pumpkin puree which contains extra sugar and spices.
    • Yogurt - Whole milk or low-fat yogurt is fine. I use plain yogurt and vanilla works, too.
    • Butter - Unsalted butter is best.
    • Egg - Bring the egg to room temperature first so it dissolves into the batter easily.
    • Gluten free flour - You can use your choice of gluten free flour here. Use a single gluten free flour like oat flour or sorghum flour, or swap a gluten free all-purpose flour blend like my homemade gluten free flour blend. You decide!
    • Sugar - Swap maple syrup or coconut sugar to make these muffins with natural sweeteners.
    • Spices - Ground cinnamon, ginger, and nutmeg.
    • Rising agents - Baking powder and baking soda.
    • Salt - I use fine sea salt or table salt.

    See the recipe card at the end of this post for the full ingredient amounts.

    Variations

    Chocolate chips are always a good idea, and I like them mini! Aim for about 1 cup of any add-ins.

    • Nuts - Crush up some walnuts or pecans and add them to the batter for crunch.
    • Chocolate - Do mini chocolate chips here so they add just the right amount of chocolate without overpowering the mini muffins. I like to sprinkle a few chocolate chips on top of each muffin, too.
    • Sweet potato mini muffins - Easily bake these muffins with sweet potato puree for another fall-influenced muffin!

    For a larger but equally fluffy pumpkin muffin, make oat flour pumpkin muffins.

    Instructions

    Rest the batter while the oven heats for the best texture later. Check the recipe card lower down for the detailed instructions.

    Pumpkin puree mixed with egg and butter in a bowl.

    1. Mix batter: Whisk together butter and pumpkin.

    Batter for gluten free mini pumpkin muffins in a bowl.

    2. Add remaining ingredients: Stir in the rest of the ingredients.

    A mini muffin tin full of gluten free mini pumpkin muffin batter.

    3. Rest: Divide the batter into the muffin tin and rest the batter.

    Gluten free mini pumpkin muffins cool in the pan.

    4. Bake: Bake for 15 minutes at 375℉, then cool to room temperature.

    Baking Tip

    Make sure to grease your muffin tin very well so that the muffins pop out easily. I use avocado oil cooking spray and it works amazingly well to help the muffins release with no problems. But, you can use regular olive oil, vegetable oil, or even butter to grease your pan.

    Chocolate chips on a few mini pumpkin muffins.

    Tips & Substitution Suggestions

    • What flour to use? This is a recipe that lets you decide what kind of gluten free flour you wish to add to the batter. Any type of gluten free flour will work, although if I am using a single gluten free flour I prefer a whole grain flour such as oat flour or brown rice flour. For the best results, whether you use gluten free all purpose flour or a single gluten free flour, measure out the flour by weight so that it equals 140 grams.
    • Try applesauce. If you want to use this base recipe to make mini applesauce muffins, substitute the 1 cup of pumpkin puree for applesauce.
    • Rest the batter. Let the batter rest while the oven heats so that the gluten free flour fully hydrates before baking.
    • Make full-size muffins. If you want larger muffins, use a regular 12-cup muffin tin.

    Proper Storage

    Store gluten free mini pumpkin muffins in an airtight container or resealable bag at room temperature for up to 3 days, or in the fridge for up to 5 days. Muffins also freeze well! Place them in a freezer-safe bag and store them in the fridge for up to 3 months. Thaw in the fridge before eating.

    The fluffy interior of a gluten free mini pumpkin muffin.

    More Gluten Free Pumpkin Recipes

    • A plate of gluten free pumpkin chocolate chip muffins and a cup of coffee.
      Gluten Free Pumpkin Chocolate Chip Muffins
    • Two halves of a slice of pumpkin bread on a plate.
      Gluten Free Pumpkin Bread
    • Gluten-free pumpkin muffins are shown on a white background.
      Gluten Free Pumpkin Muffins
    • Two gluten free pumpkin bars on plates with mini pumpkins.
      Gluten Free Pumpkin Bars

    If you tried these Gluten Free Mini Pumpkin Muffins or any other recipe on my website, please let me know how it went in the comments below! And I always appreciate a star rating if you loved it ❤️

    A bowl of gluten free mini pumpkin muffins.
    Prevent your screen from going dark

    Gluten Free Mini Pumpkin Muffins

    Nicole Spiridakis
    Gluten free mini pumpkin muffins are so soft and fluffy! Plenty of pumpkin and cozy spices combine in this easy one-bowl recipe to make the best two-bite snack.
    5 from 1 vote
    Print Recipe Pin Recipe
    Prep Time 10 minutes mins
    Cook Time 15 minutes mins
    Total Time 25 minutes mins
    Course Breakfast
    Cuisine American
    Servings 24 mini muffins
    Calories 66 kcal

    Ingredients
     
     

    • 1 cup pumpkin puree
    • ¼ cup plain whole milk yogurt
    • ¼ cup unsalted butter
    • 1 egg, lightly beaten
    • 1 ¼ cup oat flour (140 grams)
    • ½ cup sugar
    • 1 teaspoon cinnamon
    • ½ teaspoon ginger
    • ½ teaspoon nutmeg
    • 1 teaspoon baking powder
    • ½ teaspoon baking soda
    • ¼ teaspoon fine salt

    Instructions
     

    • Grease a 24-cup mini muffin tin with nonstick spray.
    • In a large bowl, whisk together the pumpkin puree, yogurt, melted butter, and egg.
    • Stir in the gluten free flour, sugar, spices, baking powder, baking soda, and salt.
    • Portion into the prepared muffin tin using about a heaping 1 tablespoon per mini cup. Preheat the oven to 375℉, and rest the batter while the oven heats. Bake for about 15 minutes, until a cake tester inserted into the center comes out clean.
    • Cool the muffins in the pan for about 5 minutes, then turn them out onto a rack to cool completely.

    Notes

    • What flour to use? This is a recipe that lets you decide what kind of gluten free flour you wish to add to the batter. Any type of gluten free flour will work, although if I am using a single gluten free flour I prefer a whole grain flour such as oat flour or brown rice flour. For the best results, whether you use gluten free all purpose flour or a single gluten free flour, measure out the flour by weight so that it equals 140 grams.
    • Try applesauce. If you want to use this base recipe to make mini applesauce muffins, substitute the 1 cup of pumpkin puree for applesauce.
    • Rest the batter. Let the batter rest while the oven heats so that the gluten free flour fully hydrates before baking.
    • Make full-size muffins. If you want larger muffins, use a regular 12-cup muffin tin.

    Nutrition

    Calories: 66kcalCarbohydrates: 9gProtein: 1gFat: 3gSaturated Fat: 1gPolyunsaturated Fat: 0.3gMonounsaturated Fat: 1gTrans Fat: 0.1gCholesterol: 12mgSodium: 70mgPotassium: 52mgFiber: 1gSugar: 5gVitamin A: 1661IUVitamin C: 0.4mgCalcium: 22mgIron: 0.5mg
    Disclaimer: Nutrition information is automatically calculated and is an estimate (I'm not a nutritionist and can't guarantee accuracy!). Even when not specified, be sure to check that all the ingredients you use are gluten free if you need them to be by reading labels on all packaging and/or confirming with the manufacturer.
    Did you make this recipe?Let me know in the comments how it went!

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    5 from 1 vote (1 rating without comment)

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    Cucina Nicolina is your home for easy gluten free baking recipes made with simple, wholesome ingredients. I'm a writer, recipe developer, and cookbook author who loves to share all things yummy and gluten free. Learn more about me.

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